Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 26 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Pismar1.1
TC
scaffold_384:90255-10337713,122
Pismar1.2
NRPS-Like
scaffold_122:123652-14311819,466
Pismar1.3
TC
scaffold_125:250148-2511971,049
Pismar1.4
NRPS
scaffold_402:86572-909054,333
Pismar1.5
NRPS-Like
scaffold_173:80862-11048929,627
Pismar1.6
TC
scaffold_173:185864-1929147,050
Pismar1.7
NRPS-Like
scaffold_134:205083-23597330,890
Pismar1.8
TC
scaffold_9:55689-7055814,869
Pismar1.9
NRPS
scaffold_9:604901-6130278,126
Pismar1.10
HYBRID
scaffold_86:103596-11548211,886
Pismar1.11
NRPS-Like
scaffold_11:279667-30036920,702
Pismar1.12
NRPS-Like
scaffold_11:453052-4605247,472
Pismar1.13
NRPS-Like
scaffold_445:2573-67234,150
Pismar1.14
TC
scaffold_445:74994-820167,022
Pismar1.15
TC
scaffold_145:119036-1226833,647
Pismar1.16
NRPS-Like
scaffold_90:94081-978223,741
Pismar1.17
TC
scaffold_190:89885-919342,049
Pismar1.18
TC
scaffold_155:64835-660951,260
Pismar1.19
TC
scaffold_155:132841-1343091,468
Pismar1.20
NRPS-Like
scaffold_47:196104-21027414,170
Pismar1.21
TC
scaffold_31:161276-1631431,867
Pismar1.22
NRPS-Like
scaffold_31:260783-2647563,973
Pismar1.23
NRPS-Like
scaffold_31:303188-31848715,299
Pismar1.24
PKS
scaffold_30:309810-32290513,095
Pismar1.25
NRPS-Like
scaffold_117:211447-22880417,357
Pismar1.26
TC
scaffold_207:99375-1009571,582