Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 26 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Rhier1.1
PKS
scaffold_59:136858-16791831,060
Rhier1.2
PKS
scaffold_43:159580-1687729,192
Rhier1.3
PKS
scaffold_37:45257-6663821,381
Rhier1.4
NRPS-Like
scaffold_37:232708-24849815,790
Rhier1.5
PKS
scaffold_35:356881-38532828,447
Rhier1.6
DMAT
scaffold_35:422084-43454912,465
Rhier1.7
PKS
scaffold_3:34552-5094816,396
Rhier1.8
TC
scaffold_3:296295-2982711,976
Rhier1.9
PKS
scaffold_5:693876-70698713,111
Rhier1.10
NRPS-Like
scaffold_4:247214-2567749,560
Rhier1.11
PKS
scaffold_7:1265594-129410528,511
Rhier1.12
PKS-Like
scaffold_6:353856-37273418,878
Rhier1.13
HYBRID
scaffold_6:974991-99180316,812
Rhier1.14
NRPS-Like
scaffold_9:741519-7479316,412
Rhier1.15
NRPS-Like
scaffold_21:694524-6991364,612
Rhier1.16
TC
scaffold_22:454849-4589464,097
Rhier1.17
NRPS-Like
scaffold_22:603315-6067843,469
Rhier1.18
PKS
scaffold_25:117156-15236035,204
Rhier1.19
NRPS
scaffold_28:204661-22887424,213
Rhier1.20
NRPS-Like
scaffold_14:385357-3889083,551
Rhier1.21
NRPS-Like
scaffold_14:713534-7176404,106
Rhier1.22
PKS
scaffold_10:1193091-12014638,372
Rhier1.23
PKS-Like
scaffold_19:144134-1526428,508
Rhier1.24
NRPS-Like
scaffold_19:755089-76875713,668
Rhier1.25
NRPS
scaffold_72:144329-17001925,690
Rhier1.26
PKS
scaffold_69:38051-5327415,223