Due to the emerging COVID-19 pandemic, JGI will not be accepting or processing any samples because of reduced onsite staffing until further notice.
Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 14 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Rhisa1.3
TC
scaffold_339:63478-703216,843
Rhisa1.4
TC
scaffold_23:243631-2490165,385
Rhisa1.6
TC
scaffold_289:28648-4273614,088
Rhisa1.8
TC
scaffold_78:114149-1154331,284
Rhisa1.9
TC
scaffold_78:126051-126756705
Rhisa1.10
TC
scaffold_78:133038-134004966
Rhisa1.11
TC
scaffold_78:139480-1412141,734
Rhisa1.13
TC
scaffold_175:97950-1024874,537
Rhisa1.15
TC
scaffold_934:7583-170369,453
Rhisa1.18
TC
scaffold_5:373682-3753651,683
Rhisa1.19
TC
scaffold_1107:4326-56451,319
Rhisa1.21
TC
scaffold_895:16823-181581,335
Rhisa1.22
TC
scaffold_885:11897-132191,322
Rhisa1.23
TC
scaffold_393:4137-54721,335