Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 24 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Rhives1.1
NRPS
scaffold_6460:2481-104828,001
Rhives1.2
TC
scaffold_4909:1103-107809,677
Rhives1.3
TC
scaffold_1086:1368-25251,157
Rhives1.4
PKS
scaffold_993:44249-6153417,285
Rhives1.5
PKS
scaffold_6392:66757-7972412,967
Rhives1.6
TC
scaffold_2570:11976-130941,118
Rhives1.7
TC
scaffold_5380:1179-23331,154
Rhives1.8
NRPS-Like
scaffold_6273:76159-8848012,321
Rhives1.9
NRPS-Like
scaffold_5418:1425-1369012,265
Rhives1.10
TC
scaffold_4519:4166-88674,701
Rhives1.11
PKS
scaffold_1566:12803-208858,082
Rhives1.12
NRPS-Like
scaffold_3459:788-37492,961
Rhives1.13
TC
scaffold_1175:5614-109665,352
Rhives1.14
TC
scaffold_3736:36901-380741,173
Rhives1.15
TC
scaffold_5108:23310-256122,302
Rhives1.16
TC
scaffold_6237:14542-187924,250
Rhives1.17
TC
scaffold_4695:17660-187881,128
Rhives1.18
TC
scaffold_1037:18153-269478,794
Rhives1.19
NRPS-Like
scaffold_631:7005-137436,738
Rhives1.20
NRPS-Like
scaffold_2854:3657-80004,343
Rhives1.21
NRPS-Like
scaffold_5897:8116-2031412,198
Rhives1.22
NRPS-Like
scaffold_4235:14923-217286,805
Rhives1.23
NRPS-Like
scaffold_4480:37756-5410616,350
Rhives1.24
NRPS-Like
scaffold_3118:53368-6764714,279