Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 36 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Rhivi1.1
TC
scaffold_404:7759-93251,566
Rhivi1.2
TC
scaffold_338:12545-138751,330
Rhivi1.3
NRPS-Like
scaffold_961:571-46054,034
Rhivi1.4
TC
scaffold_186:14507-214806,973
Rhivi1.5
NRPS-Like
scaffold_19:5595-94743,879
Rhivi1.6
TC
scaffold_359:25401-267531,352
Rhivi1.7
TC
scaffold_198:3283-44011,118
Rhivi1.8
NRPS-Like
scaffold_196:16429-2819211,763
Rhivi1.9
NRPS-Like
scaffold_514:4332-77443,412
Rhivi1.10
NRPS-Like
scaffold_167:16147-4133925,192
Rhivi1.11
TC
scaffold_161:20684-222211,537
Rhivi1.12
NRPS-Like
scaffold_389:6771-2634319,572
Rhivi1.13
NRPS-Like
scaffold_172:9980-141254,145
Rhivi1.14
NRPS-Like
scaffold_579:1150-66635,513
Rhivi1.15
TC
scaffold_54:17917-231495,232
Rhivi1.16
TC
scaffold_59:81718-9173110,013
Rhivi1.17
TC
scaffold_540:10761-150674,306
Rhivi1.18
TC
scaffold_682:2435-82525,817
Rhivi1.19
NRPS-Like
scaffold_158:982-1649015,508
Rhivi1.20
TC
scaffold_151:523-24231,900
Rhivi1.21
NRPS
scaffold_46:58033-662618,228
Rhivi1.22
NRPS-Like
scaffold_551:1220-1703115,811
Rhivi1.23
NRPS-Like
scaffold_735:8424-118483,424
Rhivi1.24
NRPS-Like
scaffold_126:3246-125779,331
Rhivi1.25
TC
scaffold_91:11437-125531,116
Rhivi1.26
NRPS-Like
scaffold_1119:1384-57614,377
Rhivi1.27
TC
scaffold_137:1112-66595,547
Rhivi1.28
PKS
scaffold_292:26415-331416,726
Rhivi1.29
NRPS-Like
scaffold_1019:3008-69453,937
Rhivi1.30
NRPS-Like
scaffold_1010:2349-65014,152
Rhivi1.31
NRPS-Like
scaffold_302:13248-2790114,653
Rhivi1.32
NRPS-Like
scaffold_468:4937-116306,693
Rhivi1.33
NRPS-Like
scaffold_305:1-35193,518
Rhivi1.34
NRPS-Like
scaffold_253:16898-262719,373
Rhivi1.35
PKS
scaffold_30:3976-1700213,026
Rhivi1.36
NRPS-Like
scaffold_38:18877-228203,943