Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 19 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Rhivul1.1
TC
scaffold_21:190603-1918171,214
Rhivul1.2
TC
scaffold_27:237241-2385761,335
Rhivul1.3
TC
scaffold_27:254879-2597414,862
Rhivul1.4
TC
scaffold_66:110030-12882018,790
Rhivul1.5
PKS
scaffold_137:32078-4508313,005
Rhivul1.6
NRPS
scaffold_3:54565-625678,002
Rhivul1.7
TC
scaffold_9:32994-343991,405
Rhivul1.8
TC
scaffold_89:95386-1009395,553
Rhivul1.9
NRPS-Like
scaffold_11:59524-628393,315
Rhivul1.10
NRPS-Like
scaffold_12:130793-14470213,909
Rhivul1.11
NRPS-Like
scaffold_12:339435-3427823,347
Rhivul1.12
NRPS-Like
scaffold_18:37460-5116413,704
Rhivul1.13
TC
scaffold_144:36192-376001,408
Rhivul1.14
NRPS-Like
scaffold_56:14292-4030426,012
Rhivul1.15
NRPS-Like
scaffold_56:54716-586213,905
Rhivul1.16
TC
scaffold_56:72280-790126,732
Rhivul1.17
NRPS-Like
scaffold_107:40862-451024,240
Rhivul1.18
NRPS-Like
scaffold_44:135659-16914133,482
Rhivul1.19
NRPS-Like
scaffold_42:41440-483596,919