Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 14 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Sclci1.1
PKS
scaffold_9:592805-60579912,994
Sclci1.2
NRPS-Like
scaffold_61:110518-1140473,529
Sclci1.3
TC
scaffold_139:18271-196441,373
Sclci1.4
TC
scaffold_133:107230-1133636,133
Sclci1.5
TC
scaffold_1:517968-53677718,809
Sclci1.6
TC
scaffold_2:380859-3823171,458
Sclci1.7
NRPS-Like
scaffold_19:352544-36775015,206
Sclci1.8
HYBRID
scaffold_142:93364-10502011,656
Sclci1.9
NRPS-Like
scaffold_53:124294-1280303,736
Sclci1.10
TC
scaffold_104:13472-149421,470
Sclci1.11
NRPS-Like
scaffold_104:24471-5826933,798
Sclci1.12
NRPS-Like
scaffold_195:3360-60812,721
Sclci1.13
NRPS-Like
scaffold_34:294131-3038979,766
Sclci1.14
NRPS-Like
scaffold_206:52775-622469,471