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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 27 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suicol1.1
NRPS-Like
scaffold_83:204005-2081754,170
Suicol1.2
NRPS-Like
scaffold_44:391030-3949323,902
Suicol1.3
TC
scaffold_41:313897-3156571,760
Suicol1.4
TC
scaffold_5:207609-2089121,303
Suicol1.5
TC
scaffold_5:2084899-20905985,699
Suicol1.6
PKS
scaffold_122:110788-12899518,207
Suicol1.7
TC
scaffold_30:76045-840768,031
Suicol1.8
TC
scaffold_1:302468-3119659,497
Suicol1.9
PKS
scaffold_1:1010008-102302113,013
Suicol1.10
NRPS-Like
scaffold_1:2733864-275759023,726
Suicol1.11
PKS
scaffold_3:1965060-19724257,365
Suicol1.12
NRPS
scaffold_2:460943-4688057,862
Suicol1.13
TC
scaffold_8:21157-229131,756
Suicol1.14
NRPS-Like
scaffold_8:805628-8095033,875
Suicol1.15
TC
scaffold_102:31582-329281,346
Suicol1.16
NRPS-Like
scaffold_11:668836-6770928,256
Suicol1.17
NRPS-Like
scaffold_11:918241-94911330,872
Suicol1.18
TC
scaffold_10:881279-95528674,007
Suicol1.19
NRPS-Like
scaffold_13:15576-194783,902
Suicol1.20
NRPS-Like
scaffold_91:104998-1139388,940
Suicol1.21
PKS
scaffold_164:83319-10179818,479
Suicol1.22
NRPS-Like
scaffold_166:82879-860323,153
Suicol1.23
NRPS-Like
scaffold_76:123865-1278854,020
Suicol1.24
PKS-Like
scaffold_289:8710-119133,203
Suicol1.25
TC
scaffold_67:77525-791161,591
Suicol1.26
TC
scaffold_60:9526-162466,720
Suicol1.27
NRPS-Like
scaffold_77:61830-663984,568