Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 43 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suicot1.1
TC
scaffold_407:45700-470921,392
Suicot1.2
TC
scaffold_98:140638-1420901,452
Suicot1.3
TC
scaffold_237:1239-1779416,555
Suicot1.4
NRPS-Like
scaffold_20:536041-5399603,919
Suicot1.5
TC
scaffold_21:470957-4726701,713
Suicot1.6
TC
scaffold_24:98964-1004931,529
Suicot1.7
NRPS-Like
scaffold_68:281785-2863274,542
Suicot1.8
TC
scaffold_64:147370-1494922,122
Suicot1.9
TC
scaffold_301:57680-590691,389
Suicot1.10
NRPS-Like
scaffold_130:52392-569394,547
Suicot1.11
TC
scaffold_134:85276-868051,529
Suicot1.12
NRPS-Like
scaffold_3:673502-6773713,869
Suicot1.13
TC
scaffold_5:777708-7836225,914
Suicot1.14
NRPS-Like
scaffold_7:686645-6902333,588
Suicot1.15
NRPS
scaffold_6:357609-3660358,426
Suicot1.16
NRPS-Like
scaffold_8:902659-9119269,267
Suicot1.17
NRPS-Like
scaffold_341:28296-370428,746
Suicot1.18
TC
scaffold_15:41396-471185,722
Suicot1.19
TC
scaffold_15:101472-1026161,144
Suicot1.20
TC
scaffold_15:335188-3366881,500
Suicot1.21
TC
scaffold_265:73185-748181,633
Suicot1.22
TC
scaffold_146:16935-261939,258
Suicot1.23
NRPS-Like
scaffold_97:231487-2344943,007
Suicot1.24
TC
scaffold_90:74572-762061,634
Suicot1.25
NRPS-Like
scaffold_106:218919-2219893,070
Suicot1.26
TC
scaffold_199:108245-1099021,657
Suicot1.27
PKS
scaffold_102:122111-13498012,869
Suicot1.28
TC
scaffold_44:81802-912469,444
Suicot1.29
NRPS-Like
scaffold_44:420950-4254724,522
Suicot1.30
TC
scaffold_41:499571-5017072,136
Suicot1.31
PKS
scaffold_48:401345-4085137,168
Suicot1.32
TC
scaffold_49:440488-4418151,327
Suicot1.33
NRPS-Like
scaffold_33:152745-17521322,468
Suicot1.34
NRPS-Like
scaffold_33:460972-4641543,182
Suicot1.35
TC
scaffold_115:142660-16014517,485
Suicot1.36
TC
scaffold_115:192337-1937451,408
Suicot1.37
TC
scaffold_363:47669-489751,306
Suicot1.38
TC
scaffold_165:114318-1154371,119
Suicot1.39
PKS
scaffold_166:4665-131428,477
Suicot1.40
TC
scaffold_73:21819-234271,608
Suicot1.41
TC
scaffold_73:108884-1159237,039
Suicot1.42
TC
scaffold_73:153747-16553511,788
Suicot1.43
TC
scaffold_70:263782-2651431,361