Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 32 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suigr1.1
TC
scaffold_21:317812-3190801,268
Suigr1.2
NRPS-Like
scaffold_22:134035-14456910,534
Suigr1.3
TC
scaffold_84:51486-527781,292
Suigr1.4
NRPS
scaffold_2:1232480-12407288,248
Suigr1.5
PKS
scaffold_5:368419-38143813,019
Suigr1.6
NRPS-Like
scaffold_5:842493-85922816,735
Suigr1.7
TC
scaffold_5:1149641-11590879,446
Suigr1.8
NRPS-Like
scaffold_7:855371-86975114,380
Suigr1.9
TC
scaffold_7:895125-9043919,266
Suigr1.10
TC
scaffold_9:396851-41695720,106
Suigr1.11
TC
scaffold_9:568947-5703091,362
Suigr1.12
PKS
scaffold_186:1599-98098,210
Suigr1.13
PKS
scaffold_17:255068-2621677,099
Suigr1.14
TC
scaffold_11:737618-75418416,566
Suigr1.15
NRPS-Like
scaffold_10:303543-3089555,412
Suigr1.16
NRPS-Like
scaffold_10:648022-6516333,611
Suigr1.17
NRPS-Like
scaffold_10:696448-7036257,177
Suigr1.18
NRPS-Like
scaffold_12:251200-26661515,415
Suigr1.19
TC
scaffold_18:160046-1620221,976
Suigr1.20
NRPS-Like
scaffold_50:191409-1954634,054
Suigr1.21
TC
scaffold_42:213821-2230089,187
Suigr1.22
TC
scaffold_42:229631-2307771,146
Suigr1.23
TC
scaffold_41:236693-2379971,304
Suigr1.24
TC
scaffold_32:28455-345396,084
Suigr1.25
NRPS-Like
scaffold_31:327110-33988312,773
Suigr1.26
TC
scaffold_30:15527-186693,142
Suigr1.27
TC
scaffold_30:36774-4710710,333
Suigr1.28
TC
scaffold_36:293299-2948611,562
Suigr1.29
TC
scaffold_34:132682-1338111,129
Suigr1.30
TC
scaffold_39:234629-24762512,996
Suigr1.31
PKS
scaffold_38:279342-29868619,344
Suigr1.32
NRPS-Like
scaffold_73:24051-287104,659