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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 34 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suiplac1.1
TC
scaffold_14:222885-2244251,540
Suiplac1.2
TC
scaffold_14:598900-6083199,419
Suiplac1.3
TC
scaffold_14:624674-6258231,149
Suiplac1.4
TC
scaffold_14:736097-76332327,226
Suiplac1.5
NRPS-Like
scaffold_14:827584-84181914,235
Suiplac1.6
TC
scaffold_10:397160-3986361,476
Suiplac1.7
PKS
scaffold_13:325870-3300314,161
Suiplac1.8
PKS
scaffold_13:616272-6236577,385
Suiplac1.9
NRPS-Like
scaffold_12:585301-5906025,301
Suiplac1.10
TC
scaffold_12:1530735-15327352,000
Suiplac1.11
TC
scaffold_12:1829147-18304651,318
Suiplac1.12
TC
scaffold_1:3994692-39980803,388
Suiplac1.13
TC
scaffold_1:4014941-402540510,464
Suiplac1.14
NRPS
scaffold_3:2853697-28619618,264
Suiplac1.15
NRPS-Like
scaffold_3:3718312-37213813,069
Suiplac1.16
TC
scaffold_2:644749-6465601,811
Suiplac1.17
NRPS-Like
scaffold_5:397436-4007803,344
Suiplac1.18
NRPS-Like
scaffold_5:493611-5002226,611
Suiplac1.19
NRPS-Like
scaffold_5:761773-78937527,602
Suiplac1.20
NRPS-Like
scaffold_5:963265-9693406,075
Suiplac1.21
NRPS-Like
scaffold_5:3247841-32517443,903
Suiplac1.22
NRPS-Like
scaffold_4:1801858-182809426,236
Suiplac1.23
TC
scaffold_4:3203771-32049271,156
Suiplac1.24
TC
scaffold_7:318221-3198141,593
Suiplac1.25
TC
scaffold_7:578036-5876739,637
Suiplac1.26
PKS
scaffold_7:640043-65113611,093
Suiplac1.27
NRPS-Like
scaffold_7:871052-8749973,945
Suiplac1.28
PKS
scaffold_7:1486994-149999813,004
Suiplac1.29
TC
scaffold_7:1960437-19621221,685
Suiplac1.30
TC
scaffold_6:103652-1048031,151
Suiplac1.31
NRPS-Like
scaffold_9:1405717-14108305,113
Suiplac1.32
PKS
scaffold_9:1454422-14625418,119
Suiplac1.33
TC
scaffold_8:827220-85400826,788
Suiplac1.34
TC
scaffold_8:1539222-15452386,016