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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 23 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suipse1.1
PKS
scaffold_56:69291-8694717,656
Suipse1.2
TC
scaffold_44:273735-2812977,562
Suipse1.3
PKS
scaffold_48:146194-1522766,082
Suipse1.4
TC
scaffold_49:38502-406082,106
Suipse1.5
NRPS-Like
scaffold_39:122769-1260243,255
Suipse1.6
NRPS-Like
scaffold_39:162703-1658833,180
Suipse1.7
NRPS
scaffold_1:70217-782408,023
Suipse1.8
NRPS-Like
scaffold_20:64033-7569411,661
Suipse1.9
TC
scaffold_21:267430-2732165,786
Suipse1.10
TC
scaffold_28:775-24051,630
Suipse1.11
TC
scaffold_4:365445-3671411,696
Suipse1.12
PKS
scaffold_4:843745-85653312,788
Suipse1.13
NRPS-Like
scaffold_108:65455-683642,909
Suipse1.14
NRPS-Like
scaffold_108:98956-1030754,119
Suipse1.15
NRPS-Like
scaffold_14:280910-2857314,821
Suipse1.16
TC
scaffold_17:288712-2930724,360
Suipse1.17
TC
scaffold_16:338518-3478909,372
Suipse1.18
NRPS-Like
scaffold_11:359097-38974230,645
Suipse1.19
NRPS-Like
scaffold_11:507035-5101683,133
Suipse1.20
NRPS-Like
scaffold_19:120883-1303109,427
Suipse1.21
TC
scaffold_115:80034-816671,633
Suipse1.22
NRPS-Like
scaffold_82:56330-606594,329
Suipse1.23
TC
scaffold_58:53932-7154017,608