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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 35 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suisub1.1
NRPS-Like
scaffold_20:70729-755644,835
Suisub1.2
TC
scaffold_20:616186-62869012,504
Suisub1.3
TC
scaffold_23:546505-55695410,449
Suisub1.4
NRPS-Like
scaffold_28:5561-105104,949
Suisub1.5
NRPS
scaffold_1:1274548-12826138,065
Suisub1.6
TC
scaffold_1:1947499-19486271,128
Suisub1.7
PKS-Like
scaffold_1:2448889-2449381492
Suisub1.8
NRPS-Like
scaffold_3:1271145-12747093,564
Suisub1.9
NRPS-Like
scaffold_3:1473807-14830049,197
Suisub1.10
NRPS-Like
scaffold_3:1502536-15120419,505
Suisub1.11
NRPS-Like
scaffold_3:1811499-18148043,305
Suisub1.12
TC
scaffold_5:152299-1570844,785
Suisub1.13
TC
scaffold_4:121724-1276225,898
Suisub1.14
TC
scaffold_7:240789-2491938,404
Suisub1.15
TC
scaffold_7:261267-2627301,463
Suisub1.16
TC
scaffold_7:740879-7420291,150
Suisub1.17
NRPS-Like
scaffold_7:1062364-10662983,934
Suisub1.18
NRPS-Like
scaffold_6:21724-250843,360
Suisub1.19
NRPS-Like
scaffold_6:62639-665633,924
Suisub1.20
PKS
scaffold_6:248405-26119212,787
Suisub1.21
TC
scaffold_6:422483-44201519,532
Suisub1.22
TC
scaffold_6:925495-9266301,135
Suisub1.23
NRPS-Like
scaffold_15:146073-1499543,881
Suisub1.24
TC
scaffold_16:764455-7663571,902
Suisub1.25
PKS
scaffold_11:677664-6844836,819
Suisub1.26
TC
scaffold_10:241127-2424611,334
Suisub1.27
NRPS-Like
scaffold_10:287564-29906811,504
Suisub1.28
TC
scaffold_19:187688-1894841,796
Suisub1.29
NRPS-Like
scaffold_19:740912-7439583,046
Suisub1.30
TC
scaffold_55:149918-1512441,326
Suisub1.31
NRPS-Like
scaffold_429:11408-153403,932
Suisub1.32
TC
scaffold_41:300620-3020951,475
Suisub1.33
TC
scaffold_33:326174-3278331,659
Suisub1.34
NRPS-Like
scaffold_35:226209-2299873,778
Suisub1.35
NRPS-Like
scaffold_39:158719-17056311,844