Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 43 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Suitom1.1
NRPS-Like
scaffold_149:30285-5561425,329
Suitom1.2
NRPS-Like
scaffold_51:202369-2062713,902
Suitom1.3
TC
scaffold_51:214850-2228247,974
Suitom1.4
NRPS-Like
scaffold_51:238710-2426233,913
Suitom1.5
NRPS-Like
scaffold_52:21012-3377612,764
Suitom1.6
TC
scaffold_52:58141-6947711,336
Suitom1.7
PKS
scaffold_52:265632-27865713,025
Suitom1.8
TC
scaffold_57:179040-1807101,670
Suitom1.9
TC
scaffold_58:171913-1734581,545
Suitom1.10
TC
scaffold_159:24718-330008,282
Suitom1.11
TC
scaffold_152:22599-306908,091
Suitom1.12
TC
scaffold_152:51253-523081,055
Suitom1.13
TC
scaffold_46:356294-37855022,256
Suitom1.14
TC
scaffold_31:193512-1978964,384
Suitom1.15
TC
scaffold_37:108316-1177959,479
Suitom1.16
TC
scaffold_37:428445-4323383,893
Suitom1.17
NRPS-Like
scaffold_37:440219-4435183,299
Suitom1.18
TC
scaffold_36:421348-43223510,887
Suitom1.19
NRPS-Like
scaffold_99:85801-957019,900
Suitom1.20
TC
scaffold_132:75276-8940614,130
Suitom1.21
NRPS-Like
scaffold_134:67046-711884,142
Suitom1.22
NRPS-Like
scaffold_1:523586-53419710,611
Suitom1.23
TC
scaffold_3:659016-6605461,530
Suitom1.24
TC
scaffold_5:887764-8936795,915
Suitom1.25
NRPS
scaffold_7:476329-4848338,504
Suitom1.26
NRPS-Like
scaffold_92:142295-1453043,009
Suitom1.27
TC
scaffold_90:27649-291201,471
Suitom1.28
PKS
scaffold_24:213485-2205567,071
Suitom1.29
TC
scaffold_24:244966-2461051,139
Suitom1.30
NRPS-Like
scaffold_27:346641-36139814,757
Suitom1.31
NRPS-Like
scaffold_102:18560-3056412,004
Suitom1.32
TC
scaffold_109:73378-745261,148
Suitom1.33
TC
scaffold_109:87579-890251,446
Suitom1.34
TC
scaffold_15:328652-3301891,537
Suitom1.35
NRPS-Like
scaffold_15:430945-4374186,473
Suitom1.36
NRPS-Like
scaffold_15:570890-5745483,658
Suitom1.37
NRPS-Like
scaffold_15:579256-5878818,625
Suitom1.38
NRPS-Like
scaffold_19:157712-1618944,182
Suitom1.39
TC
scaffold_19:580029-5814321,403
Suitom1.40
PKS
scaffold_110:53050-611488,098
Suitom1.41
TC
scaffold_78:51470-526331,163
Suitom1.42
TC
scaffold_78:91457-11092219,465
Suitom1.43
NRPS-Like
scaffold_68:35265-5035215,087