Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 22 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Thega1.1
NRPS
scaffold_863:1-31883,187
Thega1.2
PKS
scaffold_20:127244-15510627,862
Thega1.3
NRPS-Like
scaffold_23:173928-19139717,469
Thega1.4
NRPS-Like
scaffold_9:225998-24954923,551
Thega1.5
NRPS-Like
scaffold_614:2724-72314,507
Thega1.6
DMAT
scaffold_1:272622-2744591,837
Thega1.7
TC
scaffold_1:446721-4512134,492
Thega1.8
PKS
scaffold_4:44953-8348238,529
Thega1.9
TC
scaffold_8:345159-3539128,753
Thega1.10
NRPS-Like
scaffold_51:28656-317063,050
Thega1.11
TC
scaffold_57:111060-1131242,064
Thega1.12
HYBRID
scaffold_98:36510-5181615,306
Thega1.13
TC
scaffold_91:48327-498731,546
Thega1.14
PKS
scaffold_102:16920-242857,365
Thega1.15
NRPS-Like
scaffold_197:40033-421862,153
Thega1.16
TC
scaffold_47:68217-9273324,516
Thega1.17
NRPS-Like
scaffold_41:61170-655724,402
Thega1.18
TC
scaffold_48:66291-678231,532
Thega1.19
PKS
scaffold_49:25252-3807312,821
Thega1.20
NRPS
scaffold_37:68304-10182233,518
Thega1.21
TC
scaffold_166:11867-133591,492
Thega1.22
PKS
scaffold_169:37942-412273,285