Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 22 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Theter1.1
TC
scaffold_14:109667-1108571,190
Theter1.2
HYBRID
scaffold_14:383024-40698923,965
Theter1.3
TC
scaffold_10:15527-168221,295
Theter1.4
TC
scaffold_10:145149-1464381,289
Theter1.5
PKS
scaffold_10:815436-8228947,458
Theter1.6
NRPS-Like
scaffold_10:900376-9082687,892
Theter1.7
TC
scaffold_10:1184625-11860151,390
Theter1.8
HYBRID
scaffold_13:368916-38597217,056
Theter1.9
PKS
scaffold_1:2013319-20222868,967
Theter1.10
NRPS-Like
scaffold_1:2211885-22158944,009
Theter1.11
NRPS-Like
scaffold_3:1535462-15434607,998
Theter1.12
TC
scaffold_2:607464-62243514,971
Theter1.13
TC
scaffold_2:1131946-11333351,389
Theter1.14
DMAT
scaffold_5:629465-6316562,191
Theter1.15
TC
scaffold_5:1033622-105546121,839
Theter1.16
NRPS-Like
scaffold_5:2083626-20929089,282
Theter1.17
NRPS
scaffold_5:2124427-21315297,102
Theter1.18
PKS
scaffold_5:2359599-237215812,559
Theter1.19
TC
scaffold_4:1454683-14560021,319
Theter1.20
NRPS-Like
scaffold_4:1958300-197798819,688
Theter1.21
NRPS-Like
scaffold_7:1200541-121318012,639
Theter1.22
NRPS
scaffold_9:954738-9635608,822