Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 19 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Trima3.1
NRPS-Like
scaffold_370:53734-578044,070
Trima3.2
TC
scaffold_337:116108-1257839,675
Trima3.3
TC
scaffold_333:136792-1386481,856
Trima3.4
TC
scaffold_237:112623-1139231,300
Trima3.5
PKS
scaffold_275:76336-835647,228
Trima3.6
NRPS-Like
scaffold_317:17783-247436,960
Trima3.7
TC
scaffold_63:167278-168196918
Trima3.8
NRPS-Like
scaffold_645:32809-369494,140
Trima3.9
TC
scaffold_228:59638-612051,567
Trima3.10
PKS
scaffold_10:595815-63231236,497
Trima3.11
NRPS-Like
scaffold_13:73269-775344,265
Trima3.12
TC
scaffold_69:459386-4641554,769
Trima3.13
NRPS-Like
scaffold_53:281205-2855234,318
Trima3.14
NRPS-Like
scaffold_53:314182-3185624,380
Trima3.15
TC
scaffold_153:135559-1368481,289
Trima3.16
NRPS-Like
scaffold_118:290112-2956225,510
Trima3.17
NRPS-Like
scaffold_203:90884-963665,482
Trima3.18
NRPS-Like
scaffold_203:192823-1983255,502
Trima3.19
NRPS-Like
scaffold_427:45553-495133,960