199NameAssembly Length# of GenesPublication
1Chlorella sorokiniana DOE141257,881,61810,257Hovde Blake T. et al., 2018
2Chlorella sorokiniana UTEX 160259,371,6059,245Arriola MB et al., 2018
3Chlorella sorokiniana UTEX 123058,534,92012,209Hovde Blake T. et al., 2018
4Chlorella sorokiniana strain 122861,391,26011,701Hovde Blake T. et al., 2018
5Micractinium conductrix SAG 241.8060,773,8758,739Arriola MB et al., 2018
6Auxenochlorella protothecoides UTEX 2521,217,6375,688Vogler Brian W. et al., 2018
7Nannochloropsis oceanica CCAP849/1029,986,04910,044
8Seminavis robusta D6125,572,60333,143Osuna-Cruz CM et al., 2020
9Chlamydomonas eustigma NIES-249966,605,20213,365Hirooka S et al., 2017
10Trebouxiophyceae sp. bin 3300059473_978 v1.016,200,1887,783
11Trebouxiophyceae sp. bin 3300059473_6682 v1.018,077,4458,628
12Chlorellaceae sp. bin 3300059473_4402 v1.014,333,5788,227
13Chlorellaceae sp. bin 3300059473_4966 v1.014,819,4888,098
14Amoebophrya ceratii AT5.287,690,81718,158John U et al., 2019
15Undaria pinnatifida M23511,280,17312,499Shan T et al., 2020
16Neopyropia yezoensis U-5143,483,9638,598Nakamura Y et al., 2013
17Prasinoderma coloniale CCMP141325,323,1946,927Li L et al., 2020
18Fistulifera solaris JPCC DA058049,736,63314,395Tanaka T et al., 2015
19Proteomonas sulcata CCMP 1175 v1.1270,343,09534,130
20Chloromonas remiasii CCCryo 005-99 v1.0493,134,01538,828
21Polarella glacialis CCMP20882,147,483,64734,066Stephens TG et al., 2020
22Polarella glacialis CCMP13832,147,483,64737,736Stephens TG et al., 2020
23Paulinella micropora KR01707,124,08515,326Lhee D et al., 2021
24Cyclotella cryptica CCMP332 v2.0171,139,48314,429Traller JC et al., 2016
25Chlorokybus atmophyticus CCAC 022074,335,7268,693Wang S et al., 2020
26Mesostigma viride NIES-296441,698,80916,232Liang Z et al., 2020
27Mesotaenium endlicherianum SAG12.97173,768,48210,300Cheng S et al., 2019
28Gracilaria domingensis SP 40083777,739,7769,746Nakamura-Gouvea N et al., 2022
29Raphidocelis subcapitata NIES-3551,162,69713,088Suzuki S et al., 2018
30Botryococcus braunii Showa170,200,49213,943Browne DR et al., 2017
31Mesostigma viride CCAC 1140281,412,2418,789Wang S et al., 2020
32Spirogloea muscicola CCAC 0214171,136,97524,093Cheng S et al., 2019
33Klebsormidium nitens NIES-2285 v1.1103,921,76615,568Hori K et al., 2014
34Astrephomene gubernaculifera NIES-4017103,829,65013,067Yamashita S et al., 2021
35Chlamydomonas reinhardtii CC-4532 v6.1114,035,50016,090Craig RJ et al., 2023
36Mayamaea pseudoterrestris NIES-428030,627,22910,680Suzuki S et al., 2022
37Fragilaria crotonensis SAG 28.9661,849,50418,721Zepernick BN et al., 2022
38Chaetoceros tenuissimus NIES-371541,001,28817,253Hongo Y et al., 2021
39Ostreobium quekettii SAG 6.99151,902,0899,649Iha Cintia et al., 2021
40Nitzschia putrida NIES-423934,998,30713,794Kamikawa R et al., 2022
41Nannochloropsis gaditana CCMP189430,865,7418,928Schwartz AS et al., 2018
42Alaria esculenta A1487,803,96218,078Bringloe TT et al., 2022
43Nannochloris desiccata UTEX 252621,550,5258,818Sanders CK et al., 2022
44Helicosporidium sp. ATCC 5092012,373,8205,602Pombert JF et al., 2014
45Nannochloris desiccata UTEX 243720,738,0057,973Sanders CK et al., 2022
46Monodopsis strain C7359,696,95712,958Yang HP et al., 2021
47Monodopsis strain C14160,466,28312,961Yang HP et al., 2021
48Vischeria strain C74106,485,30315,625Yang HP et al., 2021
49Macrocystis pyrifera CI_03 v1.0537,452,65925,919Diesel J et al., 2023
50Pedinomonas minor SAG 1965-354,966,53910,504Xu Y et al., 2022
51Pedinophyceae sp. YPF-70127,899,9197,759Repetti SI et al., 2022
52Zygnema cf. cylindricum SAG 698-1a359,785,76014,200Feng Xuehuan et al., 2023
53Zygnema circumcarinatum UTEX 155971,310,52712,038Feng Xuehuan et al., 2023
54Zygnema circumcarinatum UTEX 156067,280,74512,436Feng Xuehuan et al., 2023
55Scenedesmus obliquus UTEX 3031205,013,58413,349Biondi Thomas C. et al., 2024
56Coccomyxa subellipsoidea C-169 v3.048,852,66610,893Blanc G et al., 2012
57Porphyridium purpureum CCMP132822,192,3388,278Bhattacharya D et al., 2013
58Microglena sp. YARC572,689,86519,590Ye N et al., 2022
59Micromonas sp. AD1 metagenome extracted assembly21,112,59311,269Duncan A et al., 2022
60Mesotaenium kramstae Lemmermann NIES-657 v3.0331,691,28115,982
61Scenedesmus obliquus UTEX 393 v2.0107,859,68019,017
62Cafeteria roenbergensis BVI36,283,8878,555Hackl T et al., 2020
63Chlamydomonas priscuii UWO241211,641,45614,754Stahl-Rommel S et al., 2022
64Monoraphidium minutum 26B-AM v1.068,170,63015,337Calhoun Sara et al., 2022
65Tetradesmus deserticola SNI-2 v1.1198,160,74017,197
66Flechtneria rotunda SEV3VF49 v1.176,784,65016,599
67Tetradesmus obliquus UTEX 72 v1.1107,156,68216,985
68Enallax costatus CCAP 276/31 v1.1127,564,97519,308
69Hyphochytrium catenoides ATCC 1871968,540,53818,481Leonard G et al., 2018
70Desmodesmus armatus UTEX B 2533 v2.0122,633,16215,634
71Chromera velia CCMP2878193,889,73024,133Woo YH et al., 2015
72Labyrinthula sp. SR_Ha_C50,948,1198,488Tan MH et al., 2021
73Hondaea fermentalgiana CCAP_4062/338,943,35011,853Seddiki K et al., 2018
74Nitzschia inconspicua GAI-293 v2.099,706,97017,968Oliver A et al., 2021
75Tribonema minus UTEX B 3156 v1.0158,345,07418,290Mahan KM et al., 2021
76Hyaloperonospora arabidopsidis Emoy2 v2.078,897,8149,138Baxter L et al., 2010
77Scenedesmus obliquus var. DOE0013 v1.0102,771,90515,938
78Scenedesmus obliquus var. UTEX 1450 v1.0104,043,31216,565
79Scenedesmus obliquus var. UTEX2630 v1.0106,020,69216,604
80Fugacium kawagutii CCMP24681,048,482,93426,609Lin S et al., 2015
81Cladocopium goreaui SCF055-011,027,792,01635,913Liu H et al., 2018
82Breviolum minutum609,476,48547,014Shoguchi E et al., 2013
83Nannochloropsis salina CCMP177627,757,2528,927Ohan JA et al., 2019
84Nemacystus decipiens Onna-1153,973,81117,099Nishitsuji K et al., 2019
85Chlamydomonas schloesseri CCAP 11/173130,201,00216,268Craig RJ et al., 2021
86Picocystis sp. ML29,463,4325,613Junkins EN et al., 2019
87Chlamydomonas incerta SAG 7.73129,236,42116,957Craig RJ et al., 2021
88Edaphochlamys debaryana CCAP 11/70142,143,00220,450Craig RJ et al., 2021
89Cladosiphon okamuranus S strain169,730,75514,750Nishitsuji K et al., 2016
90Galdieria sulphuraria Azora14,055,7666,305Rossoni AW et al., 2019
91Galdieria sulphuraria MtSh14,998,6236,160Rossoni AW et al., 2019
92Cyanidioschyzon merolae Soos12,336,8304,406Rossoni AW et al., 2019
93Galdieria phlegrea Soos14,871,2436,125Rossoni AW et al., 2019
94Galdieria sulphuraria SAG 21.9214,317,6005,956Rossoni AW et al., 2019
95Galdieria sulphuraria MS114,906,7177,441Rossoni AW et al., 2019
96Galdieria sulphuraria YNP5578.114,439,6476,118Rossoni AW et al., 2019
97Galdieria sulphuraria 557214,288,8696,472Rossoni AW et al., 2019
98Galdieria sulphuraria 00214,106,3825,912Rossoni AW et al., 2019
99Galdieria sulphuraria RT2215,626,5636,982Rossoni AW et al., 2019
100Chlorella sorokiniana str. 122861,391,26012,169Hovde Blake T. et al., 2018
101Chlorella sorokiniana UTEX 160259,371,60510,384Arriola MB et al., 2018
102Trebouxia sp. A1-252,896,78813,918Greshake Tzovaras B et al., 2020
103Picochlorum renovo14,391,4249,010Dahlin LR et al., 2019
104Auxenochlorella protothecoides UTEX 2521,217,6376,041Vogler Brian W. et al., 2018
105Chlorella sorokiniana DOE141257,881,61812,611Hovde Blake T. et al., 2018
106Picochlorum soloecismus DOE10115,252,5786,861Gonzalez-Esquer CR et al., 2018
107Chlorella sp. A9940,934,0378,298Hamada M et al., 2018
108Tetrabaena socialis NIES-571135,779,85214,296Featherston J et al., 2018
109Chlorella sorokiniana UTEX 123058,534,92012,871Hovde Blake T. et al., 2018
110Cyanophora paradoxa CCMP32998,351,90425,518Price DC et al., 2019
111Tetraselmis striata232,085,67546,696Steadman Tyler CR et al., 2019
112Chara braunii S2761,750,992,82335,672Nishiyama T et al., 2018
113Micractinium conductrix SAG 241.8060,773,87510,070Arriola MB et al., 2018
114Vitrella brassicaformis CCMP315572,700,66621,239Woo YH et al., 2015
115Ochromonas sp. CCMP1393 v1.456,491,84319,714
116Paraphysomonas imperforata CCMP1604 v1.467,191,10217,134
117Minidiscus variabilis CCMP495 v1.076,188,02225,179
118Scenedesmus sp. NREL 46B-D3 v1.0151,896,78917,399Calhoun S et al., 2021
119Chloropicon primus CCMP120517,400,6918,327Lemieux C et al., 2019
120Caulerpa lentillifera28,654,2608,818Arimoto A et al., 2019
121Chlamydomonas reinhardtii CC-503 v5.6111,100,71516,403Merchant SS et al., 2007
122Volvox carteri v2.1131,163,21113,076Prochnik SE et al., 2010
123Scenedesmus obliquus EN0004 v1.0100,077,84515,053
124Reticulomyxa filosa101,867,04539,963Glöckner G et al., 2014
125Tetrahymena thermophila SB210103,014,37526,994Eisen JA et al., 2006
126Plasmodium falciparum 3D723,326,8725,392Gardner MJ et al., 2002
127Toxoplasma gondii ME4965,668,1208,318Kissinger JC et al., 2003
128Oxytricha trifallax JRB31067,158,11224,578Swart EC et al., 2013
129Paramecium tetraurelia d4_272,094,54339,580Aury JM et al., 2006
130Trichomonas vaginalis G3176,420,06559,679Carlton JM et al., 2007
131Trypanosoma brucei brucei TREU92726,075,4948,787Berriman M et al., 2005
132Giardia intestinalis ATCC 5080311,213,6156,502Morrison HG et al., 2007
133Phaeocystis antarctica CCMP1374 v2.2198,936,09437,754
134Phaeocystis globosa Pg-G v2.3155,849,26630,220
135Chromochloris zofingiensis SAG 211-14 v5.060,130,69915,274Roth MS et al., 2017
136Chondrus crispus Stackhouse104,980,4209,808Collén J et al., 2013
137Cyanidioschyzon merolae strain 10D16,546,7474,803Nozaki H et al., 2007
138Galdieria sulphuraria 074W13,712,0047,174Schönknecht G et al., 2013
139Symbiodinium microadriaticum CCMP2467808,226,71243,403Aranda M et al., 2016
140Chrysochromulina tobin CCMP29159,073,09416,770Hovde BT et al., 2015
141Nannochloropsis oceanica CCMP1779 v2.036,454,93210,641
142Symbiochloris reticulata Scotland extracted metagenome v1.059,360,52512,315
143Symbiochloris reticulata Switzerland extracted metagenome v1.059,348,13412,701
144Symbiochloris reticulata Spain extracted metagenome v1.056,841,18112,144
145Symbiochloris reticulata Africa extracted metagenome v1.058,569,71912,720
146Porphyra umbilicalis isolate 408629187,888,98113,567Brawley SH et al., 2017
147Nannochloropsis gaditana B-3127,589,34210,929Corteggiani Carpinelli E et al., 2014
148Blastocystis hominis Singapore isolate B (sub-type 7)18,817,2456,020Denoeud F et al., 2011
149Saprolegnia parasitica CBS 223.6553,093,24820,113Jiang RH et al., 2013
150Ectocarpus siliculosus Ec 32195,810,61916,271Cock JM et al., 2010
151Phytophthora infestans T30-4228,543,50517,797Haas BJ et al., 2009
152Thalassiosira oceanica CCMP100592,185,63734,642Lommer M et al., 2012
153Auxenochlorella protothecoides 071022,924,6377,013Gao C et al., 2014
154Sorghum bicolor738,540,93235,899Paterson AH et al., 2009
155Ostreococcus tauri RCC4221 v3.012,916,8587,669Blanc-Mathieu R et al., 2014
156Ostreococcus tauri RCC1115 v1.014,904,5438,218Blanc-Mathieu R et al., 2017
157Cryptophyceae sp. CCMP2293 v1.0534,466,77333,051Dorrell RG et al., 2023
158Pavlovales sp. CCMP2436 v1.0165,407,58626,034Dorrell RG et al., 2023
159Pelagophyceae sp. CCMP2097 v1.085,824,45319,402Dorrell RG et al., 2023
160Ochromonadaceae sp. CCMP2298 v1.061,140,75220,195Dorrell RG et al., 2023
161Symbiochloris reticulata Spain reference genome v1.058,316,28212,582
162Micromonas commoda NOUM17 (RCC 299)20,989,32610,262Worden AZ et al., 2009
163Micromonas pusilla CCMP154521,945,5459,829Worden AZ et al., 2009
164Asterochloris glomerata Cgr/DA1pho v2.055,816,16010,025Armaleo D et al., 2019
165Emiliania huxleyi CCMP1516 v1.0167,727,05533,341Read BA et al., 2013
166Naegleria gruberi v1.040,964,08515,763Fritz-Laylin LK et al., 2010
167Phytophthora sojae v3.082,601,61826,584Tyler BM et al., 2006
168Phytophthora ramorum v1.166,652,40115,743Tyler BM et al., 2006
169Aureococcus anophagefferens clone 1984 v1.056,660,57811,501Gobler CJ et al., 2011
170Phaeodactylum tricornutum1,311,968377Bowler C et al., 2008
171Chlorella variabilis NC64A v1.046,159,5159,791Blanc G et al., 2010
172Selaginella moellendorffii v1.022,285Banks JA et al., 2011
173Ostreococcus sp. RCC80913,296,2923,174
174Ostreococcus lucimarinus13,204,888Palenik B et al., 2007
175Physcomitrium patens v1.1479,985,34735,938Rensing SA et al., 2008
176Arabidopsis lyrata206,667,935Hu TT et al., 2011
177Schizochytrium aggregatum ATCC 28209 v1.040,854,26010,612
178Aplanochytrium kerguelense PBS07 v1.035,774,16111,892
179Aurantiochytrium limacinum ATCC MYA-1381 v1.060,926,26714,859
180Phytophthora cinnamomi var cinnamomi v1.077,967,40226,131
181Pseudo-nitzschia multiseries CLN-47218,730,80119,703
182Bigelowiella natans CCMP2755 v1.094,701,16321,708Curtis BA et al., 2012
183Guillardia theta CCMP2712 v1.087,159,91524,840Curtis BA et al., 2012
184Phytophthora capsici LT1534 v11.064,023,74819,805Lamour KH et al., 2012
185Fragilariopsis cylindrus CCMP 110280,540,40721,066Mock T et al., 2017
186Thalassiosira pseudonana CCMP 13351,135,583386Bowler C et al., 2008
187Phaeodactylum tricornutum CCAP 1055/1 v2.026,138,75610,025Bowler C et al., 2008
188Thalassiosira pseudonana CCMP 1335 v3.031,301,78211,390Armbrust EV et al., 2004
189Chrysochromulina parva Lackey65,764,75024,838Hovde Blake T. et al., 2019
190Diacronema lutheri NIVA-4/9243,502,67113,777Hulatt CJ et al., 2021
191Saccharina japonica str. Ja548,536,07318,732Ye N et al., 2015
192Gracilariopsis chorda SKKU-201592,180,0388,855Lee J et al., 2018
193Gonium pectorale NIES-2863148,806,07316,290Hanschen ER et al., 2016
194Monoraphidium neglectum SAG 48.8769,711,82916,755Bogen C et al., 2013
195Zygnema circumcarinatum SAG 698-1b70,999,79210,678Feng Xuehuan et al., 2023
196Bathycoccus prasinos RCC110515,074,3207,900Moreau H et al., 2012
197Ulva mutabilis Foyn98,484,68911,066De Clerck O et al., 2018
198Dunaliella salina CCAP19/18343,704,39218,801Polle Juergen E. W. et al., 2017
199Populus trichocarpa v1.1485,510,91145,555Tuskan GA et al., 2006