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Info • Anomoporia myceliosa MJL 4413 v1.0

Status

[July 2018] The Anomoporia myceliosa MJL 4413 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Anomoporia myceliosa MJL 4413 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 45.71
Sequencing read coverage depth 107.69x
# of contigs 59
# of scaffolds 59
# of scaffolds >= 2Kbp 58
Scaffold N50 8
Scaffold L50 (Mbp) 2.17
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.51, 3.87, 3.42


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 85694 81748 95.4%
Ests est.fasta 174788300 172044026 98.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1783 1532
transcript 1426 1207
exon 220 140
intron 67 57
description:
protein length (aa) 419 341
exons per gene 6.48 5
# of gene models 11797


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.