Info • Armillaria ostoyae C18/9


The genome sequence and gene models of Armillaria ostoyae C18/9 were not determined by the Joint Genome Institute (JGI), but as a collaborative led by György Sipos (now at the University of Sopron). In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please contact László Nagy for permission to use these data in publications.


Summary statistics for the Armillaria ostoyae C18/9 release are below.
Genome Assembly
Genome Assembly size (Mbp) 60.11
Sequencing read coverage depth
# of contigs 106
# of scaffolds 106
# of scaffolds >= 2Kbp 106
Scaffold N50 9
Scaffold L50 (Mbp) 2.28
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.41, 4.61, 4.56

Gene Models ExternalModels
length (bp) of: average median
gene 1526 1224
transcript 1212 972
exon 220 123
intron 72 55
protein length (aa) 404 324
exons per gene 5.51 4
# of gene models 22705

Genome Reference(s)



This project was not sequenced at the JGI.