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Info • Aspergillus assulatus CBS 27911 v1.0

Status

[April 2017] The Aspergillus assulatus IBT 27911 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus assulatus CBS 27911 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 30.73
Sequencing read coverage depth 98.3x
# of contigs 806
# of scaffolds 674
# of scaffolds >= 2Kbp 611
Scaffold N50 90
Scaffold L50 (Mbp) 0.11
# of gaps 132
% of scaffold length in gaps 0.4%
Three largest Scaffolds (Mbp) 0.54, 0.48, 0.44


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 45371 42631 94.0%
Ests est.fasta 65510507 63649913 97.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1843 1605
transcript 1671 1449
exon 528 319
intron 81 61
description:
protein length (aa) 450 369
exons per gene 3.17 3
# of gene models 10548


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.