Info • Aspergillus astellatus v1.0

Status

[August 2016] The Aspergillus astellatus CBS 261.93 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus astellatus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.18
Sequencing read coverage depth 61.1x
# of contigs 270
# of scaffolds 259
# of scaffolds >= 2Kbp 227
Scaffold N50 27
Scaffold L50 (Mbp) 0.39
# of gaps 11
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.32, 1.02, 0.93


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 26275 22677 86.3%
Ests est.fasta 40646931 39699255 97.7%


Gene Models FilteredModels1
length (bp) of: average median
gene 1881 1618
transcript 1689 1455
exon 518 308
intron 87 63
description:
protein length (aa) 481 403
exons per gene 3.26 3
# of gene models 12064


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.