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Info • Aspergillus austroafricanus IBT 32289 v1.0

Status

[August 2021] The Aspergillus austroafricanus IBT 32289 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 33.24
Sequencing read coverage depth 72.8x
# of contigs 207
# of scaffolds 195
# of scaffolds >= 2Kbp 182
Scaffold N50 28
Scaffold L50 (Mbp) 0.40
# of gaps 12
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.20, 1.18, 0.90


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 47269 46490 98.4%
Ests est.fasta 325464354 321895443 98.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1965 1728
transcript 1805 1585
exon 560 347
intron 74 58
description:
protein length (aa) 485 415
exons per gene 3.23 3
# of gene models 13195


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.