Info • Aspergillus bertholletius IBT 29228 v1.0

Status

[October 2016] The Aspergillus bertholletius IBT 29228 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus bertholletius v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.01
Sequencing read coverage depth 91.8x
# of contigs 497
# of scaffolds 443
# of scaffolds >= 2Kbp 409
Scaffold N50 72
Scaffold L50 (Mbp) 0.17
# of gaps 54
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.60, 0.56, 0.49


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 31573 31012 98.2%
Ests est.fasta 81610642 80387565 98.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1842 1622
transcript 1660 1458
exon 519 313
intron 85 64
description:
protein length (aa) 461 388
exons per gene 3.20 3
# of gene models 12948


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.