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Info • Aspergillus bisporus CBS 707.71 v1.0

Status

[May 2016] The Aspergillus bisporus CBS 707.71 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus bisporus CBS 707.71 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 27.10
Sequencing read coverage depth 86.2x
# of contigs 271
# of scaffolds 244
# of scaffolds >= 2Kbp 225
Scaffold N50 27
Scaffold L50 (Mbp) 0.32
# of gaps 27
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 1.00, 0.92, 0.78


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 31288 29725 95.0%
Ests est.fasta 42213439 41532039 98.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1936 1668
transcript 1742 1488
exon 529 314
intron 86 64
description:
protein length (aa) 485 399
exons per gene 3.30 3
# of gene models 9731


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.