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Info • Aspergillus calidoustus

Status

The genome sequence and gene models of Aspergillus calidoustus have not been determined by the JGI, but were downloaded from NCBI on Sep 16, 2016. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

 

Summary statistics for the Aspergillus calidoustus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 41.10
Sequencing read coverage depth
# of contigs 210
# of scaffolds 78
# of scaffolds >= 2Kbp 65
Scaffold N50 6
Scaffold L50 (Mbp) 3.21
# of gaps 132
% of scaffold length in gaps 1.3%
Three largest Scaffolds (Mbp) 4.70, 4.24, 4.19


Gene Models ExternalModels
length (bp) of: average median
gene 1662 1381
transcript 1396 1161
exon 450 244
intron 81 61
description:
protein length (aa) 463 386
exons per gene 2.99 2
# of gene models 15139


Genome Reference(s)

Funding

This project was not sequenced at the JGI.