Info • Aspergillus calidoustus CBS 113228 v1.0

Status

[February 2021] The Aspergillus calidoustus CBS 113228 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 40.39
Sequencing read coverage depth 73.7x
# of contigs 671
# of scaffolds 633
# of scaffolds >= 2Kbp 526
Scaffold N50 72
Scaffold L50 (Mbp) 0.18
# of gaps 38
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.74, 0.66, 0.52


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 45442 43859 96.5%
Ests est.fasta 309438848 302247446 97.7%


Gene Models FilteredModels1
length (bp) of: average median
gene 1913 1678
transcript 1744 1529
exon 546 341
intron 79 60
description:
protein length (aa) 471 397
exons per gene 3.19 3
# of gene models 14510


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.