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Info • Aspergillus cervinus CBS 196.64 v1.0

Status

[November 2019] The Aspergillus cervinus CBS 196.64 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus cervinus CBS 196.64 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.08
Sequencing read coverage depth 83.1x
# of contigs 701
# of scaffolds 604
# of scaffolds >= 2Kbp 551
Scaffold N50 65
Scaffold L50 (Mbp) 0.15
# of gaps 97
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 0.66, 0.61, 0.52


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 32508 30777 94.7%
Ests est.fasta 30263661 25855267 85.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1921 1656
transcript 1723 1483
exon 526 319
intron 89 65
description:
protein length (aa) 477 398
exons per gene 3.28 3
# of gene models 11707


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.