Info • Aspergillus chrysellus CBS 472.65 v1.0

Status

[March 2017] The Aspergillus chrysellus CBS 472.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus chrysellus CBS 472.65 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.96
Sequencing read coverage depth 85.2x
# of contigs 581
# of scaffolds 549
# of scaffolds >= 2Kbp 525
Scaffold N50 91
Scaffold L50 (Mbp) 0.14
# of gaps 32
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.44, 0.42, 0.40


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 35697 35079 98.3%
Ests est.fasta 57959782 49643409 85.7%


Gene Models FilteredModels1
length (bp) of: average median
gene 1835 1577
transcript 1665 1414
exon 536 325
intron 83 64
description:
protein length (aa) 457 375
exons per gene 3.11 3
# of gene models 12926


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.