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Info • Aspergillus cibarius DTO 197-D3 v1.0

Status

The Aspergillus cibarius DTO 197-D3 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 27.08
Sequencing read coverage depth 137x
# of contigs 373
# of scaffolds 337
# of scaffolds >= 2Kbp 301
Scaffold N50 49
Scaffold L50 (Mbp) 0.16
# of gaps 36
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.49, 0.47, 0.45


Gene Models FilteredModels1
length (bp) of: average median
gene 1620 1352
transcript 1441 1197
exon 447 237
intron 82 59
description:
protein length (aa) 480 399
exons per gene 3.22 3
# of gene models 9889


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.