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Info • Aspergillus cleistominutus CBS 200.75 v1.0

Status

[December 2018] The Aspergillus cleistominutus CBS 200.75 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus cleistominutus CBS 200.75 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.46
Sequencing read coverage depth 105.6x
# of contigs 458
# of scaffolds 404
# of scaffolds >= 2Kbp 363
Scaffold N50 44
Scaffold L50 (Mbp) 0.21
# of gaps 54
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.83, 0.68, 0.67


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 26436 24639 93.2%
Ests est.fasta 44052792 26123083 59.3%


Gene Models FilteredModels1
length (bp) of: average median
gene 1937 1661
transcript 1754 1497
exon 528 311
intron 81 60
description:
protein length (aa) 503 419
exons per gene 3.32 3
# of gene models 10644


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.