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Info • Aspergillus crustosus CBS 478.65 v1.0

Status

[March 2017] The Aspergillus crustosus CBS 478.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus crustosus CBS 478.65 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.36
Sequencing read coverage depth 82.3x
# of contigs 489
# of scaffolds 462
# of scaffolds >= 2Kbp 418
Scaffold N50 53
Scaffold L50 (Mbp) 0.22
# of gaps 27
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.88, 0.76, 0.64


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 37759 36730 97.3%
Ests est.fasta 71479417 58341363 81.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1825 1596
transcript 1654 1440
exon 520 315
intron 80 60
description:
protein length (aa) 457 380
exons per gene 3.18 3
# of gene models 12063


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.