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Info • Aspergillus dentatus CBS 114.63 v1.0

Status

[June 2019] The Aspergillus dentatus CBS 114.63 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus dentatus CBS 114.63 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 29.85
Sequencing read coverage depth 55x
# of contigs 245
# of scaffolds 231
# of scaffolds >= 2Kbp 208
Scaffold N50 27
Scaffold L50 (Mbp) 0.34
# of gaps 14
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.86, 0.84, 0.82


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 47312 45947 97.1%
Ests est.fasta 139351713 94962844 68.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1987 1723
transcript 1803 1555
exon 543 320
intron 81 60
description:
protein length (aa) 500 419
exons per gene 3.32 3
# of gene models 10270


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.