Info • Aspergillus dromiae CBS 140633 v1.0

Status

[November 2019] The Aspergillus dromiae CBS 140633 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus dromiae v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.20
Sequencing read coverage depth 77.9x
# of contigs 219
# of scaffolds 175
# of scaffolds >= 2Kbp 157
Scaffold N50 23
Scaffold L50 (Mbp) 0.45
# of gaps 44
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 1.39, 1.31, 1.27


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 28766 27786 96.6%
Ests est.fasta 29252867 28242732 96.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1935 1678
transcript 1761 1521
exon 549 335
intron 81 60
description:
protein length (aa) 494 414
exons per gene 3.21 3
# of gene models 12109


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.