Info • Aspergillus egyptiacus CBS 656.73 v1.0

Status

[March 2017] The Aspergillus egyptiacus CBS 656.73 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus egyptiacus CBS 656.73 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 28.34
Sequencing read coverage depth 94.8x
# of contigs 691
# of scaffolds 682
# of scaffolds >= 2Kbp 601
Scaffold N50 102
Scaffold L50 (Mbp) 0.09
# of gaps 9
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.30, 0.29, 0.26


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 48859 47787 97.8%
Ests est.fasta 63788600 45340229 71.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1946 1696
transcript 1762 1527
exon 548 325
intron 85 62
description:
protein length (aa) 487 401
exons per gene 3.21 3
# of gene models 9890


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.