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Info • Aspergillus stellifer CBS 598.65 v1.0

Status

[August 2021] The Aspergillus stellifer CBS 598.65 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 31.76
Sequencing read coverage depth 281.21x
# of contigs 441
# of scaffolds 433
# of scaffolds >= 2Kbp 375
Scaffold N50 41
Scaffold L50 (Mbp) 0.25
# of gaps 8
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.94, 0.83, 0.73


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 31152 26393 84.7%
Ests est.fasta 42862841 42164756 98.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1975 1702
transcript 1790 1539
exon 530 310
intron 79 60
description:
protein length (aa) 509 429
exons per gene 3.38 3
# of gene models 10684


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.