Info • Aspergillus floridensis DTO 198-A8 v1.0

Status

[November 2019] The Aspergillus floridensis DTO 198-A8 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus floridensis DTO198-A8 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.48
Sequencing read coverage depth 74.8x
# of contigs 954
# of scaffolds 930
# of scaffolds >= 2Kbp 854
Scaffold N50 134
Scaffold L50 (Mbp) 0.08
# of gaps 24
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.34, 0.27, 0.26


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 35740 34368 96.2%
Ests est.fasta 44059206 42728046 97.0%


Gene Models FilteredModels1
length (bp) of: average median
gene 1933 1694
transcript 1731 1512
exon 536 318
intron 93 66
description:
protein length (aa) 474 396
exons per gene 3.23 3
# of gene models 11629


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.