Info • Aspergillus fumigatus Af293 from AspGD


The genome sequence and gene prediction of Aspergillus fumigatus were not determined by the JGI, but were downloaded from the Aspergillus Genome Database (AspGD) on July 19 2012. Please note that this copy of the genome is not maintained by AspGD and is therefore not automatically updated. This copy of the genome does not include the mitochondrial chromosome or genes. The JGI Annotation Pipeline was used to add additional functional annotation to AspGD's chromosomes and proteins.
Summary statistics for the Aspergillus fumigatus Af293 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 29.39
Sequencing read coverage depth 1
# of contigs 19
# of scaffolds 8
# of scaffolds >= 2Kbp 8
Scaffold N50 4
Scaffold L50 (Mbp) 3.95
# of gaps 11
% of scaffold length in gaps 2.0%
Three largest Scaffolds (Mbp) 4.92, 4.84, 4.08

Gene Models ExternalModels
length (bp) of: average median
gene 1634 1391
transcript 1477 1245
exon 505 275
intron 83 62
protein length (aa) 492 415
exons per gene 2.92 2
# of gene models 9781

Genome Reference(s)


This project was not sequenced at the JGI.