Status
[October 2023] This genome was sequenced with PacBio, assembled with Flye, and annotated with the JGI Annotation Pipeline. Originally processed as a metagenome, no contaminants were identified so the mitochondrial genome could be directly associated with the nuclear assembly and is available in the downloads section.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 28.84 |
| Sequencing read coverage depth | 45.7x |
| # of contigs | 13 |
| # of scaffolds | 13 |
| # of scaffolds >= 2Kbp | 13 |
| Scaffold N50 | 4 |
| Scaffold L50 (Mbp) | 3.74 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 4.81, 4.63, 4.27 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 2119 | 1632 |
| transcript | 1765 | 1428 |
| exon | 462 | 242 |
| intron | 127 | 63 |
| description: | ||
| protein length (aa) | 588 | 476 |
| exons per gene | 3.82 | 3 |
| # of gene models | 8340 |
Collaborators
- Sara Branco, University of Colorado Denver, Denver, CO
Links
- JGI MycoEd Project Portal
- JGI PhyloGroup Portals: Fungi Dikarya Ascomycota Pezizomycotina Eurotiomycetes Eurotiales Aspergillus
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
