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Info • Aspergillus heteromorphus CBS 117.55 v1.0

Status

Assembly v1 (Jun 2014) is a minimal draft assembly of PacBio gDNA reads using HGAP.

Summary statistics for the Aspergillus heteromorphus CBS 117.55 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.61
Sequencing read coverage depth 23.52x
# of contigs 205
# of scaffolds 205
# of scaffolds >= 2Kbp 202
Scaffold N50 15
Scaffold L50 (Mbp) 0.66
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 2.97, 1.98, 1.56


ESTs Data set # sequences total # mapped to genome % mapped to genome
Other JGI_RNA_contigs 29905 29670 99.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1782 1514
transcript 1564 1336
exon 499 296
intron 104 65
description:
protein length (aa) 451 370
exons per gene 3.13 3
# of gene models 11133


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.