Info • Aspergillus heterothallicus CBS 489.65 v1.0

Status

[April 2017] The Aspergillus heterothallicus CBS 489.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus heterothallicus CBS 489.65 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.43
Sequencing read coverage depth 79.6x
# of contigs 400
# of scaffolds 371
# of scaffolds >= 2Kbp 317
Scaffold N50 44
Scaffold L50 (Mbp) 0.28
# of gaps 29
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.08, 0.90, 0.72


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 32297 31918 98.8%
Ests est.fasta 57276143 55611556 97.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1831 1612
transcript 1659 1463
exon 522 318
intron 81 61
description:
protein length (aa) 469 400
exons per gene 3.18 3
# of gene models 13761


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.