Info • Aspergillus igneus CBS 466.65 v1.0

Status

[April 2017] The Aspergillus igneus CBS 466.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus igneus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.55
Sequencing read coverage depth 78.8x
# of contigs 526
# of scaffolds 491
# of scaffolds >= 2Kbp 445
Scaffold N50 52
Scaffold L50 (Mbp) 0.18
# of gaps 35
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.92, 0.63, 0.62


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 32198 31201 96.9%
Ests est.fasta 69016628 67052482 97.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1869 1619
transcript 1704 1470
exon 540 327
intron 78 61
description:
protein length (aa) 467 389
exons per gene 3.16 3
# of gene models 11877


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.