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Info • Aspergillus keveii CBS 209.92 v1.0

Status

[April 2017] The Aspergillus keveii CBS 209.92 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus keveii v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 41.42
Sequencing read coverage depth 70.8x
# of contigs 627
# of scaffolds 587
# of scaffolds >= 2Kbp 519
Scaffold N50 56
Scaffold L50 (Mbp) 0.20
# of gaps 40
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 1.22, 0.89, 0.77


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 37924 36511 96.3%
Ests est.fasta 76674901 60241468 78.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1790 1580
transcript 1622 1427
exon 517 318
intron 80 61
description:
protein length (aa) 456 385
exons per gene 3.14 3
# of gene models 15687


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.