Info • Aspergillus lentulus CBS 117885 v1.0

Status

[April 2017] The Aspergillus lentulus CBS 117885 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus lentulus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 30.57
Sequencing read coverage depth 91.8x
# of contigs 84
# of scaffolds 58
# of scaffolds >= 2Kbp 54
Scaffold N50 7
Scaffold L50 (Mbp) 1.31
# of gaps 26
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 3.09, 2.75, 2.50


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 38476 38099 99.0%
Ests est.fasta 52262141 45615042 87.3%


Gene Models FilteredModels1
length (bp) of: average median
gene 1868 1628
transcript 1708 1486
exon 550 332
intron 78 61
description:
protein length (aa) 466 390
exons per gene 3.10 3
# of gene models 11171


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.