Info • Aspergillus leporis CBS 151.66 v1.0

Status

[November 2016] The Aspergillus leporis CBS 151.66 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus leporis v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 39.43
Sequencing read coverage depth 60x
# of contigs 652
# of scaffolds 615
# of scaffolds >= 2Kbp 524
Scaffold N50 82
Scaffold L50 (Mbp) 0.16
# of gaps 37
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.57, 0.56, 0.42


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 27536 26703 97.0%
Ests est.fasta 33754468 33549801 99.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1809 1567
transcript 1615 1380
exon 494 288
intron 87 63
description:
protein length (aa) 452 373
exons per gene 3.27 3
# of gene models 12745


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.