Info • Aspergillus minisclerotigenes CBS 117635 v1.0

Status

[October 2016] The Aspergillus minisclerotigenes CBS 117635 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline.

Summary statistics for the Aspergillus minisclerotigenes v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.06
Sequencing read coverage depth 65.8x
# of contigs 308
# of scaffolds 296
# of scaffolds >= 2Kbp 251
Scaffold N50 37
Scaffold L50 (Mbp) 0.30
# of gaps 12
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.16, 0.88, 0.75


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 24787 24649 99.4%
Ests est.fasta 61224840 60651550 99.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1841 1602
transcript 1648 1437
exon 510 303
intron 88 62
description:
protein length (aa) 466 392
exons per gene 3.23 3
# of gene models 13415


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.