Info • Aspergillus multiplicatus CBS 646958 v1.0

Status

[April 2017] The Aspergillus multiplicatus CBS 646958 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus multiplicatus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 28.91
Sequencing read coverage depth 105.1x
# of contigs 220
# of scaffolds 191
# of scaffolds >= 2Kbp 170
Scaffold N50 21
Scaffold L50 (Mbp) 0.45
# of gaps 29
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.31, 0.97, 0.97


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 35616 35011 98.3%
Ests est.fasta 47544008 25157292 52.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1831 1599
transcript 1660 1436
exon 523 313
intron 81 61
description:
protein length (aa) 453 375
exons per gene 3.17 3
# of gene models 10498


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.