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Info • Aspergillus neoauricomus CBS112787 v1.0

Status

[July 2016] The Aspergillus neoauricomus CBS 112787 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus neoauricomus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 36.86
Sequencing read coverage depth 84.1x
# of contigs 387
# of scaffolds 364
# of scaffolds >= 2Kbp 327
Scaffold N50 34
Scaffold L50 (Mbp) 0.33
# of gaps 23
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.13, 0.98, 0.96


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 26922 26502 98.4%
Ests est.fasta 33798081 33348521 98.7%


Gene Models FilteredModels1
length (bp) of: average median
gene 1864 1619
transcript 1673 1442
exon 513 308
intron 87 64
description:
protein length (aa) 478 403
exons per gene 3.26 3
# of gene models 12221


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.