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Info • Aspergillus neoconicus CBS 233.90 v1.0

Status

[October 2019] The Aspergillus neoconicus CBS 233.90 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus neoconicus CBS 233.90 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 23.27
Sequencing read coverage depth 140.3x
# of contigs 114
# of scaffolds 89
# of scaffolds >= 2Kbp 83
Scaffold N50 12
Scaffold L50 (Mbp) 0.73
# of gaps 25
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.58, 1.32, 1.25


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 28207 25935 91.9%
Ests est.fasta 34692898 33924653 97.8%


Gene Models FilteredModels1
length (bp) of: average median
gene 1934 1682
transcript 1769 1540
exon 561 333
intron 79 62
description:
protein length (aa) 488 409
exons per gene 3.16 3
# of gene models 9036


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.