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Info • Aspergillus niger v1.0
Please note that this organism is for archival use only. Please see the current Aspergillus niger ATCC 1015 v4.0 site for the latest data and information.
Status

v.1.0 (April 7, 2006): The assembly release version 1.0 of whole genome shotgun reads was constructed with the JGI assembler, Jazz, using paired end sequencing reads at a coverage of 8.9X.

ATTENTION!
This site is for atrchival use only. Please see the current Aspergillus niger v3.0 site for the latest data and information.

After trimming for vector and quality, 365,698 reads assembled into 143 scaffolds totaling 37.1 MB. Roughly half of the genome is contained in 6 scaffolds all at least 2.0 MB in length.

The current draft release, version 1.0, includes a total of 11,200 gene models predicted and functionally annotated using the JGI annotation pipeline.

 
Collaborators
 
Funding

This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program and the by the University of California, Lawrence Livermore National Laboratory under Contract No. W-7405-Eng-48, Lawrence Berkeley National Laboratory under contract No. DE-AC03-76SF00098 and Los Alamos National Laboratory under contract No. W-7405-ENG-36.